Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQRTLSIIKPDALKKKVVGKIIDRFESNGLEVVAMKRLHLSVKDAENFYAIHRERPFFKDLIEFMVSGPVVVMVLEGKDAVAKNRELMGATDPKLAQKGTIRADFAESIDANAVHGSDSLENAHNEIAFFFAAREF
4HR2 Chain:B ((8-137))
--ERTLSIIKPDAVAKNVIGQIYSRFENAGLKIVAARMAHLSRADAEKFYAVHAERPFFKDLVEFMISGPVMIQVLEGEDAILKNRDLMGATDPKKAEKGTIRADFADSIDANAVHGSDAPETARVEIAFFFPEMNV
General information:
TITO was launched using:
RESULT:
Template:
4HR2.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52358 for 1015 contacts (-51.6/contact) +
2D Compatibility (PS) -13714 + (NN) -1292 + (LL) 272
1D Compatibility (HY) -13200 + (ID) 4600
Total energy: -84892.0 ( -83.64 by residue)
QMean score : 0.611
(partial model without unconserved sides chains):
PDB file :
Tito_4HR2.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4HR2-query.scw
PDB file :
Tito_Scwrl_4HR2.pdb
: