Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLLIALVLFLWWLNLGAKEADFISDWEYGLALYKNPRGVACAKCHGIKGEQQEITFYY-EKGEKKILYAPKINHLDFKTFKDALSLGK--------GMMPKY--NLNLEEIQAIYLYITSLGHKDERKDPSKP
1W2L Chain:A ((3-99))
-----------------------MPLAELGARLYRE---KACFSCHSIDGSRLVGPSFKGLYGSTRTFEDGTTAVADENYLRESILQPGAKVVQGYPNVMPASYASLSEREVAALIEFIKQQQ-----------
General information:
TITO was launched using:
RESULT:
Template:
1W2L.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33002 for 537 contacts (-61.5/contact) +
2D Compatibility (PS) -8988 + (NN) -375 + (LL) 2552
1D Compatibility (HY) -1200 + (ID) 900
Total energy: -41913.0 ( -78.05 by residue)
QMean score : 0.432
(partial model without unconserved sides chains):
PDB file :
Tito_1W2L.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1W2L-query.scw
PDB file :
Tito_Scwrl_1W2L.pdb
: