Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MKVTFQVPSITCNHCVDKIEKFVGEIEGVSFIDASVEKKSVVVEFDTPATQDLIKEALLDAGQEVV-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 1JK9 Chain:B ((3-245)) | TNDTYEATYAIP-MHCENCVNDIKACLKNVPGINSLNFDIEQQIMSVESSVA--PSTIINTLRNCGKDAIIRGAGKPNSSAVAILETFQKYTIDQKKDTAVRGLARIVQVGENKTLFDITVNGVPEAGNYHASIHEKGDVSKGVESTGKVWHKFDEPIECFNESDLGKNLYSGKTFLSAPLPTWQLIGRSFVISKSLNHPENEPSSVKDYSFLGVIARSAGVWENNKQVCACTGKTVWEERKDALA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JK9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -55684 for 403 contacts (-138.2/contact) +
2D Compatibility (PS) -7197 + (NN) -2491 + (LL) 168
1D Compatibility (HY) -4800 + (ID) 650
Total energy: -70654.0 ( -175.32 by residue)
QMean score : 0.797
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