Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MPSNALSVGEIAHLINVSHSSVHNWIKTNLLEKLEIDHKIYVKTSSFLDFCRNHLGKNKLNRYANKSLKSAHNHQELILKYLEMLENSSDLENLGSYYEKELSNTTRNLEGIYYTPNRIVEQLFTLPKDFDTTQAIFCDPAVGSGNFVMHALKLGFKVENIYGYDTDAFAVALTKKRIKERYRLDCPNIMQKDFLSLKHAPQFDCIFTNPPWGKKYNQNQKENFKQQ--FNLHQSLDSASLFFMASLNCLKENAYLGLLLPESCLNIDAFSKMREMALKFQMRSLIDFDKPFKNLMTKAVGLALKKTHNKDQKISCFYQNSEFKRSPSSFFNNPKKIF------NIHCSHQKNKILDHLFSLPHITLKNNAHFALGIVTGNNKEKLHPKQEKNTIPIFRGSDILKDRLKAPSQFINADLKDCQQVAPLSLYQAREKIVYKFISSKLVFFYDNKQRLFLNSANMFVLKENFPINAHALKELLNSDLMQFIFESLFKTHKILRKDLECLPLFAQFINNSFDEKFYLKNLGIEKKDPKHFTIRKNHACCLSFGFRG |
2ADM Chain:A ((21-413)) | ----------------------------------------------------------------------------------------------------------------VETPPEVVDFMVSLAEA--PRGGRVLEPACAHGPFLRAFREAHGTGYRFVGVEIDPKALDLPPW----------AEGILADFLLWEPGEAFDLILGNPPYGIVGVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPATWLVLEDFALLREFLAREGKTSVYYLGEVFPQKKVSAVVIRFQKSGKGLSLWDTQESESGFTPILWAEYPHWEGEIIRFETEETRKLEISGMPLGDLFHIRFAARSPEFK---------KHPAVRKEPGPGLVPVLTGRNLKPGWVDYEKNHSGLWMP-KERAKELRDFYATPHLVVAHTKGTRVVAAWDERAYPWREEFHLLPKEGVRLDPSTLVQWLNSEAMQKHVRTLYRD----------------FVPH------------LTLRMLERLPVRREY------GFHT |
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General information:
TITO was launched using:
| RESULT:
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Template: 2ADM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -144414 for 2982 contacts (-48.4/contact) +
2D Compatibility (PS) -39306 + (NN) -10444 + (LL) 11288
1D Compatibility (HY) -18800 + (ID) 3000
Total energy: -204676.0 ( -68.64 by residue)
QMean score : 0.293
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