Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIDDLIQKEFLAHKEALEKSLES--LQDALKQSVHLLIETLENQGKILICGNGGSASDAQHFAAELTGRYKLERKGLSVISLSTDTSALTAIANDYGYEEVFARQVEALGNKEDILIGISTSGNSKNVLKAYEKAKDLGMKTLSLAGRDGGKMKPLSDIALIVPSGDTPRIQEMHILMIHILCDCIERHFARKN
2XBL Chain:A ((6-197))
-ELTYITNSIAEAQRVMAAMLADERLLATVRKVADACIASIAQGGKVLLAGNGGSAADAQHIAGEFVSRFAFDRPGLPAVALTTDTSILTAIGNDYGYEKLFSRQVQALGNEGDVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGNRGGEMRELCDLLLEVPSADTPKIQEGHLVLGHIVCGLVEHSIFGK-
General information:
TITO was launched using:
RESULT:
Template:
2XBL.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101833 for 1573 contacts (-64.7/contact) +
2D Compatibility (PS) -21200 + (NN) -16480 + (LL) 128
1D Compatibility (HY) -17200 + (ID) 4200
Total energy: -160785.0 ( -102.22 by residue)
QMean score : 0.687
(partial model without unconserved sides chains):
PDB file :
Tito_2XBL.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2XBL-query.scw
PDB file :
Tito_Scwrl_2XBL.pdb
: