Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTNFEKIIAQNRLKTNAVLTTYCAIFAFIGLLVDAIRINANDLGIALFKLMTFQIFPTITIVMFVVAFVIILVCIQNFSSIMLSGDEYKLIDPSKVLSSKENQIHRLLLELLEEAKLHFEPKLYIINAPYMNAFASGWDESNSLIALTSALIERLDRDELKAVIAHELSHIRHNDIRLTMCVGILSNIMLLVANFSVYFFMGNRKNSGANLARMILWVLQI---ILPFLTLLLQMYLSRTREYMADSGAAFLMHDNKPMIRALQKISNDYTNNDYKEIDKNS----TRSAAYLFNAEMFSTHPSIKNRIQSLRKRVI------------------------------ |
2LGZ Chain:A ((1-273)) | MGS-----------------------------------------------SHHHHHHSSGLVPRGS------------HSTWVTRTAYS--SPSVVLPSQTPDGKLALIDDFREAYYWLRM-----NSDEDSKVAAWWDYGYQ-IGGMADRTTLVDNNTWNNTHIAIVGKANASPEEKSY-----EILKEHDVDYVLVIFGGLIGFGGDDINKF-LWNIRISEGIWPE-EIKERDFYTAEGEYRVDARASETMRNSLLYKMSYKDFPQLFNGGQATDRVRQQMITPLDVPPLDYFDEVFTSENWNVRIYQLKKDDAQGRTLRDVGELTRSSTKTRRSIKRPELGLRV |
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General information:
TITO was launched using:
| RESULT:
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Template: 2LGZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 19407 for 1881 contacts (10.3/contact) +
2D Compatibility (PS) -25273 + (NN) -10073 + (LL) 8492
1D Compatibility (HY) -1600 + (ID) 1700
Total energy: -10747.0 ( -5.71 by residue)
QMean score : 0.130
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