Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MDEIKTLLVDFFPQAK--HFGIILIKAIVVFCIGFYFSFFLRNKTMKLLSKKDEILANFVAQVTFILILIIT------TIIALSTLG-----------VQTTSIITVLGTVGIAVALALKDYLSSIAGGIIL----------IILHPFKKGDIIEISGLEGKVEALNF-FNTSLRLHDGRLAVLPNRSVANSNIINSNNTACRRIEWVCGV--GYGSDIELVHKTIKDVIDGMEKIDKNMPTFIGIT------------------DFGQSSLNFTIRVWAKIEDGIFNVRSELIERIKN--ALDANRIEIPFNKLDISINKQDSSK----------- |
| 1TRK Chain:A ((3-337)) | QFTDIDKLAVSTIRILAVDTVSKANSGHPGAPLGMAPAAHVLWSQMRMNPTNPDWI---NRDRFVLS-NGHAVALLYSMLHLTGYDLSIEDLKQFRQLGSRTPGHPEFELPGVEVTTGPLGQGISNAVGMAMAQANLAATYNKPGFTLSDNYTYVFLGDGCLQEGISSEASSLAGHLKLGNLIAIYDDNKITIDGATSISFD--EDVAKRYEAYGWEVLYVENGNEDLAGIAKAIAQA-----KLSKDKPTLIKMTTTIGYGSLHAGSHSVHGAPLKADDVKQLKSKFGFNPDKSFVVPQEVYDHYQKTILKPGVEANNKWNKLFSEYQKKFPELGAELARRLSGQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1TRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160831 for 2015 contacts (-79.8/contact) +
2D Compatibility (PS) -27342 + (NN) 939 + (LL) 1132
1D Compatibility (HY) -3600 + (ID) 2000
Total energy: -191702.0 ( -95.14 by residue)
QMean score : 0.204
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