Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFTLRELPFAKDSMGDFLSPVAFDFHHGKHHQTYVNNLNNLIKGTDFEKSSLFAILTKSSGGVFNNAAQIYNHDFYWDCLSPK-ATALSDELKEALEKDFGSLEKFKEDFIKSATTLFGSGWNWAAYNLDTQKIEIIQTSNAQTPVTDKKV-PLLVVDVWEHAYYIDHKNARPVYLEKFYGHVNWHFVSQCYEWAKKEGLGSVDYYINELVHKKA
4L2D Chain:B ((2-191))
-FELPSLPYAIDALEPHISKETLEFHHGKHHNTYVVKLNGLIPGTKFENKSLEEIVCSSDGGVFNNAAQIWNHTFYWNSLSPNGGGAPTGAVADAINAKWGSFDAFKEALNDKAVNNFGSSWTWLV-KLADGSLDIVNTSNAATPLTDDGVTPILTVDLWEHAYYIDYRNVRPDYLKGFWSLVNWEFANANFA----------------------
General information:
TITO was launched using:
RESULT:
Template:
4L2D.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -111779 for 1492 contacts (-74.9/contact) +
2D Compatibility (PS) -19421 + (NN) -5216 + (LL) 1808
1D Compatibility (HY) -18000 + (ID) 4650
Total energy: -157258.0 ( -105.40 by residue)
QMean score : 0.518
(partial model without unconserved sides chains):
PDB file :
Tito_4L2D.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4L2D-query.scw
PDB file :
Tito_Scwrl_4L2D.pdb
: