Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFSLSYVSKKFLSVLLLISLFLSACKSNNKDKLDENLLSSGTQSSKELNDKRDNIDKKSYAGLEDVFLDNKSISPNDKYMLLVFGRNGCSYCERLKKDLKNVKELRNYIKEHFSAYYVNISYSKEHNFKVGDKDKNDEKEIKMSTEELAQIY---AVQSTPTIVLSDKTGKTIYELPGYMP-------SVQFLAVLEFIGDGKYQDTKNDEDLTKKLKAYIKYKTNLSKSKSS |
3FK8 Chain:A ((3-133)) | -------------------------------------------ALNLPYDEHADAWTQVKKALAAGKRTHKP-------TLLVFGANWCTDCRALDKSLRN-QKNTALIAKHFEVVKID----------VGNFDRN---------LELSQAYGDPIQDGIPAVVVVNSDGKVRYTTKGGELANARKMSDQGIYDFFAKITE-------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3FK8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -43208 for 873 contacts (-49.5/contact) +
2D Compatibility (PS) -13570 + (NN) -11081 + (LL) 5952
1D Compatibility (HY) -3200 + (ID) 1650
Total energy: -66757.0 ( -76.47 by residue)
QMean score : 0.482
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