Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MALLFTGACGYIGSHTARVFLEKTKENIIIIDDLSTGFLEHIKALERYYPNRVAFIQANLNETQKLDAFLNKQQLKDPIEAVLHFGAKISVEESMRLPLEYYTNNTLNTLGLVKLCLKHAIKRFIFSSTAVVYGES-GSSLSEESPL-NPINPYGASKMMSERILLDASKV-ADFKCVILRYFNVAGACMHNDYTTPYTLGQRTL-NATHLIKIACECAVGKRKKMGIFGTNYPTRDGTCIRDYIHVDDLANAHLASYHTLLEKNKSEIYNVGYNQGHSVKEVIEKVKEISNKDFLVEILDKRQGDPASLIANNSKILQNTPFKPLYNNLDTIIKSALSWEEHLLKFQ |
| 1UDB Chain:A ((1-334)) | MRVLVTGGSGYIGSHTCVQLLQ-NGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEI---LHDH-AIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSSATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSG------DMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTR-TLDEMAQDTWHWQSRHPQGY |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1UDB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -206610 for 2997 contacts (-68.9/contact) +
2D Compatibility (PS) -35526 + (NN) -14130 + (LL) 140
1D Compatibility (HY) -20400 + (ID) 5650
Total energy: -282176.0 ( -94.15 by residue)
QMean score : 0.492
|
|
|