Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKTNGLFKMWGLFLVLIALVFNACSDSHKEKKDALEVIKQRGVLKVGVFSDKPPFGSVDSKGNYQGYDVVIAKRMALDLLGDENKIEFIPVEASARVEFLKANKVDIIMANFTRTKEREKVVDFANPYMKVALGVIS-KD--GVIKNIEELK--DKELIVNKGTTADFYFTKNYPNIKLLKFEQNTETFLALLNNKAIALAHDNTLLLAWVKQHPEFKLGIT-SLGDKDVIAPAIKKGNPKLLEWLNNEIDSLISSDFLKEAYQETLEPIYGDGIKPEEIIFE |
| 3KBR Chain:A ((6-236)) | --------------------------------SRLDRILESGVLRVATTGDYKPFSYRTEEGGYAGFDVDMAQRLAESL---GAKLVVVPTSWPNLMRDFADDRFDIAMSGISINLERQRQAYFSIPYLRDGKTPITLCSEEARFQTLEQIDQPGVTAIVNPGGTNEKFARANLKKARILVHPDNVTIFQQIVDGKADLMMTDAIEARLQSRLHPELCAVHPQPF-DFAEKAYLLPR-DEAFKRYVDQWLHIAEQSGLLRQRMEHWL---------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KBR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129804 for 1796 contacts (-72.3/contact) +
2D Compatibility (PS) -24463 + (NN) -12097 + (LL) 3068
1D Compatibility (HY) -6000 + (ID) 2500
Total energy: -171796.0 ( -95.65 by residue)
QMean score : 0.542
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