Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
------MFEKIRKILADIEDSQNEIEMLLKLANLSLGDFIEIKRGSMDMPKGVNEAFFTQLSEEVERLKELINALNKIKKGLLVF----------------
1WA8 Chain:B ((601-695))
MTEQQWNFAGIEAAASAIQGNVTSIHSLLDEGKQSLTKLAAAWGGSG------SEAYQGVQQKWDATATELNNALQNLARTISEAGQAMASTEGNVTGMFA
General information:
TITO was launched using:
RESULT:
Template:
1WA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -12905 for 431 contacts (-29.9/contact) +
2D Compatibility (PS) -7751 + (NN) -2476 + (LL) 76
1D Compatibility (HY) 1600 + (ID) 850
Total energy: -22306.0 ( -51.75 by residue)
QMean score : 0.615
(partial model without unconserved sides chains):
PDB file :
Tito_1WA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1WA8-query.scw
PDB file :
Tito_Scwrl_1WA8.pdb
: