Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceLYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTLEDSERNELWIPHYENPVSWPVGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKMIIET------------ELIDQSGAKYGLGSSAAATVAVINALMT---------------KFYPEISMLKKFKLAALSHLVVQGNGSCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSVGWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSAIKENRRILQELGTKAGV-NIETSLLKELADSAENMGGAGKSSGSGGGDCGIAF---SKTKELAEKLVNEWEKLGIKHLPFHTGR--VQITE-------------
1KVK Chain:A ((1-394))--MLSEVLLVSAPGKVILHGEHAVVH-GKVALAVALNLRTFLVLRPQSNGKVSLNLPNVGIKQVWDVATLQLLDTEKLKKVAGLPRDCVGNEGLSLLAFLYLYLAICRKQRTLPSLDIMVWSELPPGAGLGSSAAYSVCVAAALLTACEEVTNPLKDRGSIGSWPEEDLKSINKWAYEGERVIHGNPSGVDNSVSTWGGALRYQQGKMSSLK------------------------RLPALQILLTNTKVPRSTKALVAGVRSRLIKFPEIMAPLLTSIDAISLECERVLGEMAAAPVPEQYLVLEELMDMNQHHLNALGVGHASLDQLCQVTAAHGLHSKLTGAGGGGCGITLLKPGLERAKVEAAKQALTGCGFDCWETSIGAPGVSMHSATSIEDPVRQALG


General information:
TITO was launched using:
RESULT:

Template: 1KVK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -117410 for 2748 contacts (-42.7/contact) +
2D Compatibility (PS) -36043 + (NN) -11263 + (LL) 2692
1D Compatibility (HY) -8400 + (ID) 3400
Total energy: -173824.0 ( -63.25 by residue)
QMean score : 0.427

(partial model without unconserved sides chains):
PDB file : Tito_1KVK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1KVK-query.scw
PDB file : Tito_Scwrl_1KVK.pdb: