Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQQNYKEVAVAISNFEPVTMFV-SPNQYKNARKELPD------TIRVIEMSNDDAWIRDYGPSFLVDDKGDMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCELERIDYYSQKDFILEGCSIHVDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHAQKVIWLKHGFYLDETNGHVDNIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANKTDAKGRTFIIHKLHCPDPVLITQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLF-DDPKDKDAQELLEKLYPDRKIVGIKAREIL--LGGGNIHCITQHLPDKSTIRE----------------------------------------------------------------------------------------------------- |
| 4YTB Chain:A ((1-422)) | -AFQETNPPAGPVRAIAEYERSAAVLVRYPFGI-------------PMELIKELAKNDKVITIVASESQKNTVITQYTQSGVNLSNCDFIIAKTDSYWTRDYTGWFAMYDTNKVGLVDFIYNRP----------RPNDDEFPKYEAQYLGIEMFGMK-LKQTGGNYMTDGYGSAVQSHIAYT---ENSSLSQAQVNQKMKDYLGITHHDVV--QDPNGEYINHVDCWGKYLAPNKILIRKVPDN-HPQHQALEDMAAYFAAQTCAWGTKYEVYRALATNE---------------------------QPYTNSLILNNRVFVPVNGPASVDNDALNVYKTAMPGYEIIGVKGASGTPWLGTDALHCRTHEVADKGYLYIKHYPILGEQAGPDYKIEADVVSCANATISPVQCYYRINGSGSFKAADMTMESTGHYTYSFTGLNKNDKVEYYISAADNSGRKETYPFIGEPDPFKFTCMNE |
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General information:
TITO was launched using:
| RESULT:
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Template: 4YTB.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -152817 for 2694 contacts (-56.7/contact) +
2D Compatibility (PS) -33741 + (NN) -15323 + (LL) 2072
1D Compatibility (HY) -8800 + (ID) 3300
Total energy: -211909.0 ( -78.66 by residue)
QMean score : 0.474
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