Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDIPYLKMMQKEHDFFAKTMRDSNIEVLYLEKLAAEALREA--NNKESFLTKMIKESNQMD--ESALYVRDYLMSF-DEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFTRDPAAVIGNGVTINRMFQPARRRESIFIELILKHHPRFSNQDIPVWSGRGEPFSLEGGDELVLNEETVLVGVSERTDARAVERLAESLFNR-SPKIKRVLAVEIPETRSFMHLDTVFTMVNFAQFTIHPAIQNQQGELNIYILEKSENG--LE-ITPRRDFQRVIAEVLDEPEIDFIPCGGED--VIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSRGRGGPRCMTMPLVRENLK |
| 1S9R Chain:A ((7-409)) | --KFKGIHVYSEIGELESVLVHEPGREIDYITPARLDELLFSAILESHDARKEHKQFVAELKANDINVVELIDLVAETYDLASQEAKDKLIEEFLEDSEPVLSEEHKVVVRNFLKAKKTSRELVEIMMAGITKYDLGIE----------ADHELIVDPMPNLYFTRDPFASVGNGVTIHYMRYKVRQRETLFSRFVFSNHPKLIN--TPWYYDPSLKLSIEGGDVFIYNNDTLVVGVSERTDLQTVTLLAKNIVANKECEFKRIVAINVPKWTNLMHLDTWLTMLDKDKFLYSPIAN---DVFKFWDYDLVNGGAEPQPVENGLPLEGLLQSIIN-KKPVLIPIAGEGASQMEIERETHFDGTNYLAIRPGVVIGYSRNEKTNAALEAAGIKVLPFHGNQLSLGMGNARCMSMPLSRKDVK |
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General information:
TITO was launched using:
| RESULT:
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Template: 1S9R.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175278 for 3505 contacts (-50.0/contact) +
2D Compatibility (PS) -42780 + (NN) -29081 + (LL) 1356
1D Compatibility (HY) -34400 + (ID) 6850
Total energy: -287033.0 ( -81.89 by residue)
QMean score : 0.522
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