Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTASVFVAGKLLPETMEALSKWDVKAFSGEENITEAELINNVTEVDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEATAELTLGLILDVARR-------ISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQAVAKRAAAFGMNII-YSGHQPKEAAKEWNAEFVSQ-KELLKRSDVVTIHAAYSPSLKHLLNETTLKTMKSSAFLINAARGPVVEEAALIKALETGVIAGAALDVFEFEPKIGEDFAKLD--NVVLTPHIGNATVETRAAMGKIAIANVEAVLAGKAPLHSVY |
| 3GA0 Chain:A ((83-341)) | ------------------------------------------------------------LEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRTTWLHQALREGTRV--QSVEQIREVASG---AARIRGETLGIIGLERVGQAVALRAKAFGFNVLFYDPYLSDGIERALGLQRVSTLQDLLFHSDCVTLHCGLNEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWYSEQASIEMREEAAREIRRAITGRIP----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GA0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -130472 for 1829 contacts (-71.3/contact) +
2D Compatibility (PS) -27380 + (NN) -14526 + (LL) 5892
1D Compatibility (HY) -16800 + (ID) 5350
Total energy: -188636.0 ( -103.14 by residue)
QMean score : 0.510
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