Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -----VDSEMNHDFDLEKQFAFFVVNFRMSKHDFEELTEVEKNFIMKEWENKVIFESTMLRNAVLNAEQNLNRKRNSRFID-LHKKRQKKADVNYTVNALQAISENEAKEGKAWIDRIYGANGLRRPKNKEERRNVNGGF |
2EQO Chain:A ((1-140)) | GSSGSSGMNAAVVRRTQEALGKVIRRPPLTEKLLSKPPFRYLHDIITEVIRMTGFMKGLYTDAEMKSDNVKDKDAKISFLQKAIDVVVMVSGEPLLAKPARIVAGHEPERTNELLQIIGKCCLNKLSSDDAVRRVLAGEK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EQO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 26109 for 1017 contacts (25.7/contact) +
2D Compatibility (PS) -14048 + (NN) -1117 + (LL) 0
1D Compatibility (HY) 400 + (ID) 500
Total energy: 10844.0 ( 10.66 by residue)
QMean score : ?
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