Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQILGINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDMVGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIVEAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLANHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAANMMTKANELDPNNSVDLVLAGHNHQYTNG--LVGKTRIVQSYNNGKAFSDVTGELDKTTGDFVSPPDAKITYNT-RSVTPNADITAVTEDAKSRIEGVINETIGLA-NKDVISRDTNPDNKAIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAAQAVQPFGN-ILQVVEMTGADILEALNQQYLS---------NQTYFLQISGLKYTFTDTDDLDHAYKVASVTTEDGTPLKTDQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQKAAGKVITAQKEGRKVYKSQAEIDKETKDAAIKAIKEATKINKLAEKDKTLTGTTLPGATVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTFQATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTTTSNTSTTGTSSNTSLPTTGDTAGLATVFGVILTTTALYVLRKRS |
| 2WDC Chain:A ((77-554)) | ----------------------------------ERGTPLAYLLSYVDFVELARTF------GPIGGMGALTALIRDQKARVEAEG-----GKALVLDGGDTWTNSGL-SLLTRGEAVVRWQNLVGVDHMV-SHWEWTLGRERVEELLGL-----------------FRGEFLSYNIVDDLFGDP--LFPAYRIHRVGPYALAVVGASYPYVKVSHPESFTEGLSFALDERRLQEAVDKARAEGANAVVLLSHNGMQLD---------------AALAE------RIRGIDLILSGHTHDLTPRPWRVGKTWIVAGSAAGKALMRVDLKLWKGG---IANLRVRVLPVLAEHLPKAEDVEAFLKAQLAPHQDHLFTPLAVSET--LLYK--------RDTLYSTWDQLVGEAVKAIY------PEVEVVFSPAVRWGTTIL---PGQAITWDHLYAYTGFTYPELYLFYLRGAQIKAVLEDIASNVFTSDPFYQQGGDVSRVFGLRYVLDPDAP---TGERVREVEVGGRPLDPNRRYLAAAYGGRLQ------RVGEAKPGYEPRPIYEVLAEYLRSV----GRVRVRPEPNVKVIGRN------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WDC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -96289 for 3923 contacts (-24.5/contact) +
2D Compatibility (PS) -50219 + (NN) -15084 + (LL) 9168
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -170974.0 ( -43.58 by residue)
QMean score : 0.434
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