Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKERTTMMSNLKKFGLAFLSVILLVNVIFQTNFVKAATNYGSDFLKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLDFSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENVPVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWADAENPELIQWVVRVNYSKQNIQNAVYEDFIGPKQVVDF--------NSIKAFHGEFDPDDN-FTPG--AE----VPSSAITQTTDGFKVDLGNL----TDSVKISYYTTSTD-NGASPNYTNKGQLTGDNFIKQ-EIEVATPTSGG---------GGGGEGTTGSVELTKTDDSSQKNPLEGAEFKLVNGAGAT-----------VQTGLKTNADGKLAISNLKYDTYQLIETKAPQGYVLDAS--PVKFTIDDTHQSLFVSKENTAIKGSVSLEKVDRDTKSLLADAEFELQDKDGNTLKTNLKTDQKGKLTVADLLPGEYQFVETKAPTGYILDTTPLKFKISTEALNVTVTKENTKKPEIPKVPVPPKKPEKPDKIISEDSKQTALPKTGDSPLVNGWGLLLVAISASGLIALRRK |
2WW8 Chain:A ((581-826)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RYFHTIVTEKKSIENGTITDPMGELIDLQLGTDGRFDPADYTLTANDGSRLENGQAVGGPQNDGGLLKNAKVLYDTTEKRIRVTGLYLGTDEKVTLTYNVRLNDEFVSNKFYDTNGRTTLHPKEVEQNTVRDFPIPKIRDVRKYPEITISKEKKLGDIEFIKVNKN-DKKPLRGAVFSLQKQHPDYPDIYGAIDQNGTYQNVRTGEDGKLTFKNLSDGKYRLFENSEPAGYKPVQNKPIVAFQIVNG-------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2WW8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 6190 for 1187 contacts (5.2/contact) +
2D Compatibility (PS) -21571 + (NN) -8717 + (LL) 20160
1D Compatibility (HY) -5600 + (ID) 2150
Total energy: -11688.0 ( -9.85 by residue)
QMean score : 0.319
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