Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLDKSVPHISVIMVNHDATNYPEFHLPAGYSFCFYKDGLEEDWCRLQLETGQ---VLS----MDSIRARFETEFGNEKEKLTKRCIFVKAPNGEIIGTAMLWDGNTFGKIESRIHWVAVLDSHGGKGIAKALLSKILGL----NKSKFVYLTTQTGSYQAIYLYRKFGFEKYVGKTPENWKTVNFQEEKETAWQIIENKIAEHQA
3OWC Chain:A ((13-160))
----------------------------ELQLVPFQLGHFPILQRWFATEKELVQWAGPALRHPLSLEQMHEDLAESRRRPPLRLLWSACRDDQVIGHCQLLFDRR--NGVVRLARIVLAPSARGQGLGLPMLEALLAEAFADADIERVELNVYDWNAAARHLYRRAGFREEGLRRSA---------------------------
General information:
TITO was launched using:
RESULT:
Template:
3OWC.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59916 for 885 contacts (-67.7/contact) +
2D Compatibility (PS) -14737 + (NN) -6929 + (LL) 4448
1D Compatibility (HY) -2800 + (ID) 1000
Total energy: -80934.0 ( -91.45 by residue)
QMean score : 0.469
(partial model without unconserved sides chains):
PDB file :
Tito_3OWC.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3OWC-query.scw
PDB file :
Tito_Scwrl_3OWC.pdb
: