Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFLQGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQ-LLSAVKRASRQKNIPLNNSVSLDTPMAEDDVDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKEVLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE------- |
3MZY Chain:A ((45-204)) | -------------------------------------------------EDLVQEGILGLLKAIKFYDETKS-SFSSFAFLCIRREMISAIRKANTQ------------------------------------KEEAYLLKEEIEEFKKFSENNFSKFEKEVLTYLIRGYSYREIATILSKNLKSIDNTIQRIRKKSEEWIKEEENIKR |
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General information:
TITO was launched using:
| RESULT:
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Template: 3MZY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 16679 for 788 contacts (21.2/contact) +
2D Compatibility (PS) -12936 + (NN) -10721 + (LL) 6464
1D Compatibility (HY) -1200 + (ID) 1400
Total energy: -3114.0 ( -3.95 by residue)
QMean score : 0.335
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