Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTNTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYGNGAVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQDGLKELQQITPLLLGTANQLLTIDDIKSLRE---------PVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEIT-PFYQKSAEEICALFDSVYVSFYKG---IGGIAGAILAGNDDFVQEAKIWKRRYGGDLISLYPY----------ILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGVKTVPEVP---VSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQEKSADVCAFEVSVGDAFAEIPAKNLELVFRCLEKEL---------------------------- |
| 1JG8 Chain:A ((5-347)) | ----------MIDLRSDTVTKPTEEMRKAMAQA-EVG--DDVYGEDPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAH--TQRGDEVILEADSHIFWYEVGAMAVLSGVMPHPVPGK--NGAMDPDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNA-SIASGVPVKEYAGYADSVMFCLSK-GLCAP-VGSVVVGD---RDFIERARKARKML--------GGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKEI-GYSVN--PEDVK-TNMVILRTDNLKV-NAHGFIEALRNSGVLANAVS---------------------------------DTEIRLVTHKDVSRNDIEEALNIFEKLFRKFS |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JG8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -133516 for 2429 contacts (-55.0/contact) +
2D Compatibility (PS) -31647 + (NN) -16224 + (LL) 4396
1D Compatibility (HY) -4400 + (ID) 2950
Total energy: -184341.0 ( -75.89 by residue)
QMean score : 0.396
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