Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIINSNFRSLGSYIMENIYKIPNYQREYSWEETELEDLW-----MDLSQ--------IINGETESHFFGQIVIHVDKKEK-AKLIIDGQQ-RTSTAVIFLAAMRELFTEMYNAGWDDAQFDAQDI----------TTKFIGRYTQTRDERKLILGENDKSYFSNRIQSVSSEQLG--------------LQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEKCSV-MFVETDDFNEAFIIFETLNARGKDLETADL-------------LKNHLFKIANKKVG-----EVKKNWKQMLEFIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGMKNP-AEDNFFETDSQ-----QVLNDLKRLGAKSFYPIIL------AMVKKDYGPNEIYEVLSAIEVLVVRNFVISGLVANKYETEFSKIAFKIYQEEVESVTEIINLIRTNIIADDVFL-----------NNFSSFKTTNKLRLRYILKKINDSYSKEIA--VLNDNNKIHL-----E-HIMPIKADGWDIIKEEHEEYLWKI-------------GNLTLLGSE------------------------------YNKKSTNKIFNDKKDIYE-------------------YSEVQLTRKLLDYDEWNIDVIKERQVELAELAVNIWKV----------------- |
| 4RDR Chain:A ((32-748)) | ----SRPRATSGLLHTSTASDKIISGDTLRQKAVNLGDALDGVPGIHASQYGGGASAPVIRGQTGRRI--KVLNHHGETGDMADFSPDHAIMVDTALSQQVEILRGPVTLLYSSGNVAGLVDVADGKIPEKMPENGVSGELGLRLSSGNLEKLTSGGINIGLGKNFVLHTEGLYRKSGDYAVPRYRNLKRLPDSHADSQTGSIGLSWVGEKGFIGVAYSD-RRDQYGLPAH--SHEYDDCHADIIWQKSLINKRYLQLYPHLLTEEDIDYDNPGLSCGHSGRPWIDLRNKRYELRAEWKQPFPGFEALRVHLNRNDYRHDEKAGDAVENFFNNQTQNARIELRHQPI-GRLKGSWGVQYLQQKSSALSAISEAVKQPMLLDNKVQHYSFFGVEQANWDNFTLEGGVRVEKQKASIQYDKALIDRENYYNHPLPDLGA-HRQTARSFALSGNWYFTPQHKLSLTASH--QERLPSTQELYAHGKH--VATNTFEVGNKHLNKERSNNIELALGYEGDRWQYNLALYRNRFGNYIYAQTLNDGRGPKSIEDDSEMKLVRYNQSGADFYGAEGEIYFKPTPRYRIGVSGDYVRGRLKNLPSLPGREDAYGNRPFIAQDDQNAPRVPAARLGFHLKASLTDRIDANLDYYRVFAQNKLARYETRTPGHHMLNLGANYRRNTRYGEWNWYVKADNLLNQSVYAHSSFLSDTPQMGRSFTGGVNVKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 4RDR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 144393 for 3958 contacts (36.5/contact) +
2D Compatibility (PS) -54288 + (NN) 31642 + (LL) 1668
1D Compatibility (HY) 32000 + (ID) 1550
Total energy: 153865.0 ( 38.87 by residue)
QMean score : ?
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