Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPSEEDMFSCFRLCPYNQVKVVILGQDPYHGPGQAHGLSFSVQKDVRIPPSLRNIYKELKTDL-DIEPADHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILWGNHAIKAASGITNPQ-HLIIKGVHPSPLAASRGFFGS-KPFSKTNAFLEEHERKPIDWDLNEQ
1LAU Chain:E ((32-244))
----WRPLMEPELANPLTAHLLAEYNRRCQTEEVLPPREDVFSWTRYCTPDEVRVVIIGQDPYHHPGQAHGLAFSVRANVPPPPSLRNVLAAVKNCYPEARMSGHGCLEKWARDGVLLLNTTLTVKRGAAASHSRIGWDRFVGGVIRRLAARRPGLVFMLWGTHAQNAIR--PDPRVHCVLKFSHPSPL--SKVPFGTCQHFLVANRYLETRSISPIDWSV---
General information:
TITO was launched using:
RESULT:
Template:
1LAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -101876 for 1623 contacts (-62.8/contact) +
2D Compatibility (PS) -22790 + (NN) -13924 + (LL) 980
1D Compatibility (HY) -20400 + (ID) 4500
Total energy: -162510.0 ( -100.13 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_1LAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1LAU-query.scw
PDB file :
Tito_Scwrl_1LAU.pdb
: