Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLNNEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLSTTPIEQNGLHGNPDKAFVGSISGDSPGLGVNHAPIAKLAAKYVNEAHVHDISGNSIQDIITVLSTGAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVIITGFDKNNFYINDPYGHKNRAVKRSVLEEGWSAMGKQAIYLSRP |
| 3K8U Chain:A ((5-141)) | ----------------------------------------------------HYKLVPQIDTRD----CGPAVLASVAKHYGSNYSIAYLRELSKTNK---QGTTALGIVEAAKKLGFETRSIKADMTLFDYNDLTYPFIVHVIK--GKRLQHYYVVYGSQNN--QLIIGDPDPSVKVTRMSKERFQSEWTGLAIFLAPQ------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3K8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -42298 for 1100 contacts (-38.5/contact) +
2D Compatibility (PS) -14643 + (NN) -5309 + (LL) 7732
1D Compatibility (HY) -2800 + (ID) 950
Total energy: -58268.0 ( -52.97 by residue)
QMean score : 0.309
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