Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINYKDGLAVLPDGKIVSEYPFIPGIDASGVVVNSK--SDQFQVGDEVIVTSYD-F-----------------------------------------GVSYFGGYSEFIRVPAEWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPNAGKIAVSGATGGVGSLSSAILSKRGFS-VVASSGKSDAKEFLEKFGVSEIVSREAFQ----PEKVRALDKQLYAGAIDCVGG-KPLSYLLTAVQY-GGAVTTCGMSAGGKL-DTTVFPFILRGIQLFGIDSVLCP-MSKRERIWNRLA-TDYKLTNLESLATEIAFSELPESLHQVMNGGVTGRYLVKVK |
| 2FZW Chain:A ((4-371)) | VIKCKAAVAWEAGKP--LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADP-EGCFPVILGHLGAGIVESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAK--LEPG-SVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAKEFGATECINPQDFSKPIQEVLIEMT-DGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQ-LVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEF--VTHNLSFDEINKAFELMHSGKSI-RTVV--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FZW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194146 for 2799 contacts (-69.4/contact) +
2D Compatibility (PS) -33190 + (NN) -5048 + (LL) 504
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -246380.0 ( -88.02 by residue)
QMean score : 0.541
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