Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWRE------KPNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVASGEMEHV--YDRNQSGLEQALEDIASFCRKERDVFLVGEISSDKLPEIARYS--SKKMLDVTFNFNFGSVDQ-------------LDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIVKTQL---LAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQAL--QTGTDEKQALEIAIEKTRDKARGPMIFPDGKP--FTLGEPWIKMATLPE--------EEARMMWDFYQALLAFRKENDFKEMEYTFLKL----DGEVLSY---QRGE-FIFLLHFGEEEITYPLQGNYQLVFGEAMMVENGIRMGAHTGIALRVEE |
| 4M8U Chain:A ((3-520)) | -EWWKEAVVYQIYPRSFYDANGDGFGDLQGVIQKLDYIKNLGADVIWLSPVFDSPQDDNGYDISDYKNMYEKFGTNEDMFQLIDEVHKRGMKIVMDLVVNHTSDEHAWFAESRKSKDNPYRDYYLWKDPKPDGSEPNNWGSIFSGSAWTYDEGTGQYYLHYFSKKQPDLNWENEAVRREVYDVMRFWMDRGVDGWRMDAIGSISKYTDFPDYETDHSRSYIVGRYHSNGPRLHEFIQEMNREVLSHYDCMTVGEANGSDIEEAKKYTDASRQELNMIFTFEHMDIDKEQNSPNGKWQIKPFDLIALKKTMTRWQTGLMNVGWNTLYFENHDQPRVISRWGNDRKLRKECAKAFATVLHGMKGTPFIYQGEEIGMVNSDM-PLEMYDDLEIKNAYRELVVENKTMSEKEFVKAVMIKGRDHARTPMQWDAGKHAGFTAGDPWIPVNSRYQDINVKESLEDQDSIFFYYQKLIQLRKQ--YKIMIYGDYQLLQENDPQVFSYLREYRGEKLLVVVNLSEEKALF---------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4M8U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175327 for 3997 contacts (-43.9/contact) +
2D Compatibility (PS) -51739 + (NN) -31464 + (LL) 2576
1D Compatibility (HY) -41600 + (ID) 9250
Total energy: -306804.0 ( -76.76 by residue)
QMean score : 0.449
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