Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAFRENVLEILEEITET--DEVVQNTNIKLFDEGLLDSMATVQLLIEIEEKLDITVPVSEFDRDEWATPEMIITQLEALK
2JQ4 Chain:A ((1-75))
--MNATIREILAKFGQLPTPVDTIADEADLYAAG-LSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKL--
General information:
TITO was launched using:
RESULT:
Template:
2JQ4.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -17600 for 506 contacts (-34.8/contact) +
2D Compatibility (PS) -7553 + (NN) -2181 + (LL) 768
1D Compatibility (HY) -5600 + (ID) 1000
Total energy: -33166.0 ( -65.55 by residue)
QMean score : 0.481
(partial model without unconserved sides chains):
PDB file :
Tito_2JQ4.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2JQ4-query.scw
PDB file :
Tito_Scwrl_2JQ4.pdb
: