Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MPSKKKKIVVIGRSNLQNLYIHTVLLKKLPAEIYLID---DQAKTSVQDFDYASYYHADVTIHSGTFNECRNADIVVFFQEEMSNQIVSKEDNVALIIEKVKKMMATGFRGIVLVATAESNVVAALIKRFSGLSANQIITLGTMLATSYFQVEIAKLFKISPKNVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEDQKRISAEDLQNLTKMITKIPDFPFENKDGCTFRFSTVTVLAELTEVILRDEARVITVGVEVKEAYGLENPVFISVPAVIGAEGVRELLELNLSDDEQKELKQIAAKTTEKLEELQLNKGGIS |
| 1EZ4 Chain:A ((1-314)) | SMPNHQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSGEYSDCKDADLVVITAGA------LVNKNLNILSSIVKPVVDSGFDGIFLVAANPVDILTYATWKFSGFPKERVIGSGTSLDSSRLRVALGKQFNVDPRSVDAYIMGEHGDSEFAAYSTATIGTRPVRDVAKEQ--GVSDDDLAKLEDGVRNKAYDIINLK-GATF-YGIGTALMRISKAILRDENAVLPVGAYMDGQYGL-NDIYIGTPAIIGGTGLKQIIESPLSADELKKMQDSAATLKKVLNDGLAE----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1EZ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -270783 for 2667 contacts (-101.5/contact) +
2D Compatibility (PS) -32660 + (NN) -15131 + (LL) 824
1D Compatibility (HY) -18400 + (ID) 4350
Total energy: -340500.0 ( -127.67 by residue)
QMean score : 0.641
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