Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQ--TASGIYSYLPLATLMLRKIETIIREELEAIGAAELLMPALQPAELWQE-SGRWNDYGPELMRLKDRA----SRDFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFI-MKDAYSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGEDTIAYSDASDYAANTEMAPVLYMEKKSHELEKDLEKVATPDQKSITDIVGFLEVPIEKTMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLGPINVPENMRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDLSPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILSAIAEQSNDENGFVWDKQISPFDLHLIPVNMKS--EEQVAFAETLYTSLQDAGFSVLIDDRAERAGVKFADADLIGLPIRITVGKK-AAEGVVEVKIRKTGEMIEVRQDELLNTLPILFGDK |
| 1NJ8 Chain:A ((7-377)) | ---------------------YSDILEKAEIYDVRYPIKGCGVYLPYGFKIRRYTFEIIRNLLDESGHDEALFPMLIPEDLLAKEAEHIKGFEDEVYWVTHGGKTQLDVKLALRPTSETPIYYMMKLWVKVHTDLPIKIYQIVNTFRYETKHTRPLIRLREIMTFKEAHTAHSTKEEAENQVKEAISIYKKFFDTLGIPYLISKR---------------------------PE------WD-------------------KF-----------------------------------------------------PGA--------------------EYTMA---------------------------------------FD-------------TIFP--DG-----RTMQIATVHNLGQNFSKTFEIIFETPTGDKDYAYQTCYGIS-DRVIASIIAIHGDEKGLILPPIVAPIQVVIVPLIFKGKEDIVMEKAKEIYEKLK-GKFRVHIDDRDIRPGRKFNDWEIKGVPLRIEVGPKDIENKKITLFRRDTMEKFQVDETQLMEVVEKTLNN- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -186510 for 2903 contacts (-64.2/contact) +
2D Compatibility (PS) -38494 + (NN) -9463 + (LL) 14048
1D Compatibility (HY) -24800 + (ID) 4700
Total energy: -249919.0 ( -86.09 by residue)
QMean score : 0.473
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