Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSKVLEQVEAIVAPITDELQLELVDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHVTSYEPID-GRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF |
2KCK Chain:A ((1-112)) | --------------------------MVDQNPEEYYLEGVLQYDAG-NYTESIDLFEKAIQL----DPEESKYWLMKGKALYNL-----ERYEEAVDCYNYVINVIEDEYNKDVWAAKADALRYI--------EGKEVEAEIAEARAKLEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2KCK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 7048 for 730 contacts (9.7/contact) +
2D Compatibility (PS) -11388 + (NN) -1029 + (LL) 4504
1D Compatibility (HY) -2800 + (ID) 900
Total energy: -4565.0 ( -6.25 by residue)
QMean score : 0.340
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