Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSLTFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIISTEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKVMFGLQKEVLDAYGLER
1OZ9 Chain:A ((8-148))
----KNRVLVKLKKRKVRKDKIEKWAELALSALGL--NNVELSVYITDDQEIRELNKTYRKKDKPTDVLSFPMGEEFGGYKIL-------------GDVVISQDTAERQARELGHSLEEEVKRLIVHGIVHLLGYDHEKGGEEEKKFRELENYVLS-KLSK
General information:
TITO was launched using:
RESULT:
Template:
1OZ9.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14342 for 1059 contacts (-13.5/contact) +
2D Compatibility (PS) -15580 + (NN) -10671 + (LL) 1772
1D Compatibility (HY) -6800 + (ID) 2350
Total energy: -47971.0 ( -45.30 by residue)
QMean score : 0.497
(partial model without unconserved sides chains):
PDB file :
Tito_1OZ9.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1OZ9-query.scw
PDB file :
Tito_Scwrl_1OZ9.pdb
: