Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTITVDGEKIK-EIIDIPDHEIAVQMLLEKLINHKVIGSYDEITGIGHRVVHGGERFPESVYIDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDV--VSVAVFDTAFHQTMPPASYLYSLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVSGISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMN-GVDAIIFTAGIGENSSYIREKVLRGLEFMGVYWDPALNQVRG--EERFLNYPHSPVKVIIIPTNEELMIARDVETIKNNR
3SK3 Chain:A ((18-414))SKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAECFHLPEARIKWKMDGSKQEAALGAGAAHSEALNFIVNTILAQKP-ELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDSASFAPLHNPAHLIGIAEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYSLYKEHGVRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEG-------GDIDPAIIFHLHDTLGMSVDQINKML------LGLTEVTSDCRYVEDNYA-TKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINK-EGTRPAVVIPTNEELVIAQDASRLT---


General information:
TITO was launched using:
RESULT:

Template: 3SK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -216883 for 3178 contacts (-68.2/contact) +
2D Compatibility (PS) -40327 + (NN) -11512 + (LL) 488
1D Compatibility (HY) -32400 + (ID) 8200
Total energy: -308834.0 ( -97.18 by residue)
QMean score : 0.529

(partial model without unconserved sides chains):
PDB file : Tito_3SK3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3SK3-query.scw
PDB file : Tito_Scwrl_3SK3.pdb: