Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTITVDGEKIK-EIIDIPDHEIAVQMLLEKLINHKVIGSYDEITGIGHRVVHGGERFPESVYIDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDV--VSVAVFDTAFHQTMPPASYLYSLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEGGKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVSGISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMN-GVDAIIFTAGIGENSSYIREKVLRGLEFMGVYWDPALNQVRG--EERFLNYPHSPVKVIIIPTNEELMIARDVETIKNNR |
3SK3 Chain:A ((18-414)) | SKLVLVLNCGSSSLKFAIIDAVNGDEYLSGLAECFHLPEARIKWKMDGSKQEAALGAGAAHSEALNFIVNTILAQKP-ELSAQLTAIGHRIVHGGEKYTSSVVIDESVIQGIKDSASFAPLHNPAHLIGIAEALKSFPQLKDKNVAVFDTAFHQTMPEESYLYALPYSLYKEHGVRRYGAHGTSHFYVTQEAAKMLNKPVEELNIITCHLGNGGSVSAIRNGKCVDTSMGLTPLEG-------GDIDPAIIFHLHDTLGMSVDQINKML------LGLTEVTSDCRYVEDNYA-TKEDAKRAMDVYCHRLAKYIGSYTALMDGRLDAVVFTGGIGENAAMVRELSLGKLGVLGFEVDHERNLAARFGKSGFINK-EGTRPAVVIPTNEELVIAQDASRLT--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3SK3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -216883 for 3178 contacts (-68.2/contact) +
2D Compatibility (PS) -40327 + (NN) -11512 + (LL) 488
1D Compatibility (HY) -32400 + (ID) 8200
Total energy: -308834.0 ( -97.18 by residue)
QMean score : 0.529
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