Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKKGLLITVMLMVMLALGACSSSESKEDQWSRIKKDKEVVIGLDDSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWNGYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAKKPEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNIIT---G-G-FDATDFAVGMRKSDKELQKKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ |
2Y7I Chain:A ((3-228)) | ---------------------------------VSARTLHFGTSATYAPYEFVDADNKIVGFDIDVANAVCKEMQAECSFTNQSFDSLIPSLRFKKFDAVIAGMDMTPKREQQVSFSQPYYEGLSAVVVTRKGAYHTFADLKGKKVGLENGTTHQRYLQDKQ-------QAITPVAYDSYLNAFTDLKNNRLEGVFGDVAAIGKWLKNN--P-DYAIMDERASDPDYYGKGLGIAVRKDNDALLQEINAALDKVKASPEYAQMQEKWFT------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Y7I.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67895 for 1831 contacts (-37.1/contact) +
2D Compatibility (PS) -23746 + (NN) -7690 + (LL) 4364
1D Compatibility (HY) -15600 + (ID) 3100
Total energy: -113667.0 ( -62.08 by residue)
QMean score : 0.520
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