Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFFLLFLVLTLLVVMPLLIAEFVIGRGSG----GDAVQAYKTLAPGTKWSLLGKLGVVGASILFSFYSVVGGWIITYLIKTLAGGIA---GENQASLLHDFQ--------VTTANPWI---SVGATILFIL---LNVIVISRGVVSGIEKMSKFMMPALFILFIVLIIRS--LTLPG--AMEGVAFFLRPDFSHFTAQTVLI-TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAI-FPAAFSF----NITPDAGPG---LLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA-GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIILPVGALFIAIFVGYRLPRELLLKEFTTSSHFGKKVFIVWLFLIKYIAPIAIILVFLSATGLIDFLF |
| 4MM6 Chain:A ((5-390)) | ----REHWATRLGLILAMAGYAVDLGNFLRFPVQAAENGGGAFMIPYIIAFLLVGIPLMWIEWAMGRYGGAQGHGTTPAIFYLLWRNRFAKILGVFGLWIPLVVASYYVYIESWTLGFAIKFLVGLVPEPP-TDPDSILRPFKEFLYSYIGVPKGDEPILKPSLFAYIVFLITMFINVSILIRGISKGIERFAKIAMPTLFILAVFLVIRVFLLETPNGTAADGLNFLWTPDFEKLKDPGVWIAAVGQIFFSLGLGFGVLITFASYVRKDQDIVLSGLTAATLNEKASVILGGSISIPAAVAFFGVANAVAIAKAGAFNLGFITLPAIFSQTAGGTFLGFLWFFLLFFAGLTSSIAGMQGMIAFLEDELKLSRKHAVLWTAAIVFFSA-------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4MM6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -369689 for 2917 contacts (-126.7/contact) +
2D Compatibility (PS) -36012 + (NN) -12022 + (LL) 9320
1D Compatibility (HY) -39600 + (ID) 6100
Total energy: -454103.0 ( -155.67 by residue)
QMean score : 0.381
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