Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQA-ISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHPN--------KKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK |
3TQI Chain:A ((20-241)) | ---------------------------AQLIARRVREIGVYCELMPCDID--EETIRDFNPHGIILSGGPE---------------------------APAFIFEIGCPVLGICYGMQTMAYQLGGKVN-------------------EFGHAQLRVLNPAFLFDGIEDQVSPQGEPLLDVWMSHGDIVSELPPGFEATACTDNSPLAAMADF--KRRFFGLQFHPEVTHT--PQGHRILAHFVIH------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3TQI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -71293 for 1257 contacts (-56.7/contact) +
2D Compatibility (PS) -16351 + (NN) -3274 + (LL) 5876
1D Compatibility (HY) -8800 + (ID) 1800
Total energy: -95642.0 ( -76.09 by residue)
QMean score : 0.332
|
|
|