Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------MTRVTVWNEFLHEKEDDAVLAIYPDGIHGQIASFLEKAGIEAGTATLEEPEHGLTEEVLANTDVLI-WWGHMGHDRVEDKIVDRVQKRV-LEGMGLVVLHSGHMS------KIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPTPDELIFLGW-----FEGGEVFRSG-----ITYKRGNGR-IFYFQP-GHESYPTYHHPDIQQVIINGVHWCAEGRKNYPAYGNHQPLEKIGRK |
| 4JQS Chain:A ((6-250)) | GYPANYAKAPRFKALIYYTQHAEEAHVQFAEQATTFFKKLNYGDGF---VLDITTDFSKYPYEKLKEYNVIIMLNTSPNTKAERDAFEQ-----YMENGGGWVGFHAAAYNDKNTHWPWFVKFLGGGVFYCNNWPPQPVLVEVDNEEHPVTKNLPASFVAPASEWYQWTPSPRQNKDVEVLLSLSPKNYPLGIKDVVNFGDFPIVWSNKNYRMIYL--NMGHGD-EEFIDGTQNLLLVNAFRWVVSKDKSGNPFLK---------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JQS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -77431 for 1700 contacts (-45.5/contact) +
2D Compatibility (PS) -23269 + (NN) -5194 + (LL) 1560
1D Compatibility (HY) -8800 + (ID) 1450
Total energy: -114584.0 ( -67.40 by residue)
QMean score : 0.280
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