Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRKMAVISLVLLLFLVGCGKEEAAQKPEQKTDKEPKIVATTVAITEIMDKLDLPLVGIPSSSK--KLPKRYADVKETGSPMGPDLEIIRMLKPDMVLSTKTL-EADLKSGFEGADLEADFLDFTSIASMQTEIKNLGAKFDRIEEATKLNKDLTSDIDQVKSNVAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVE-YLASNTEYLQSANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNAPEALKEMEKMLYDN- |
1N2Z Chain:A ((1-245)) | --------------------------------AAPRVITLSPANTELAFAAGITPVGVSS--YSD-YPPQAQKIEQVSTWQGMNLERIVALKPDLVIAWRGGNAERQVDQLASLGIKVMWVDATSIEQIANALRQLAPWSPQPDKAEQAAQSLLDQYAQLKAQYADKPKKRVFLQFGI-NPPFTSGKESIQNQVLEVCGGENIFKDSRV-PWPQVSREQVLARSPQAIVITGGPDQIPKIKQYWG--------EQL----KIPVIPLTSDWFE-RASPRIILAAQQLCNALSQVD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1N2Z.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -109975 for 1938 contacts (-56.7/contact) +
2D Compatibility (PS) -26034 + (NN) -13704 + (LL) 4128
1D Compatibility (HY) -9200 + (ID) 2450
Total energy: -157235.0 ( -81.13 by residue)
QMean score : 0.484
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