Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASS----AVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWP------------------VAGK--YRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLL--VAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKG----------ILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLETGKRVGPDPDDLEYFLSSIERERAYLASENEE |
| 4JII Chain:X ((9-291)) | ----------LSTKAKMPIVGLGTWKSPLGK-VKEAVKVAIDAGYRHIDCAYVYQNEHEVGEAIQEKIQEKAVKREDLFIVSKLWPTFFERPLVRKAFEKTLKDLKLSYLDVYLIHWPQGFKSGDDLFPKDDKGNAIGGKATFLDAWEAMEELVDEGLVKALGVSNFSHFQIEKLLNKPGLKYKPVTNQVECHPYLTQEKLIQYCHSKGITVTAYSPLGSPDRPWAKPEDPSLLEDPKIKEIAAKHKKTAAQVLIRFHIQRNVIVIPKSVTPARIVENIQVFDFKLSDEEMATI------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 4JII.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -140072 for 2071 contacts (-67.6/contact) +
2D Compatibility (PS) -25984 + (NN) -6519 + (LL) 3064
1D Compatibility (HY) -24000 + (ID) 5550
Total energy: -199061.0 ( -96.12 by residue)
QMean score : 0.467
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