Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LRTAQKKGEDFVVFFFTPMCGSCQ-IASRLVDVVIE-ADGIQTEVAKVNLNYVPDIAQSLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE
1XWB Chain:A ((20-84))
-------GKLVVLDFFATWCGPCKMISPKLVELSTQFADNVV--VLKVDVDECEDIAMEYNISSMPTFVFLKNG----------------------
General information:
TITO was launched using:
RESULT:
Template:
1XWB.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -63131 for 373 contacts (-169.3/contact) +
2D Compatibility (PS) -6909 + (NN) -1660 + (LL) 2684
1D Compatibility (HY) -8000 + (ID) 1250
Total energy: -78266.0 ( -209.83 by residue)
QMean score : 0.667
(partial model without unconserved sides chains):
PDB file :
Tito_1XWB.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1XWB-query.scw
PDB file :
Tito_Scwrl_1XWB.pdb
: