Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------------------------------------MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKHTKPSNVNPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVIDK |
| 1JJ2 Chain:S ((1-119)) | SKQPDKQRKSQRRAPLHERHKQVRATLSADLREEYGQRNVRVNAGDTVEVLRGDFAGEEGEVINVDLDKAVIHVEDVTLEKTDGE-----------EVPRPLDTSNVRVTDLDLEDEKREARLESEDDSA------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JJ2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 1362 for 494 contacts (2.8/contact) +
2D Compatibility (PS) -8192 + (NN) 2931 + (LL) 732
1D Compatibility (HY) -2000 + (ID) 1000
Total energy: -6167.0 ( -12.48 by residue)
QMean score : 0.403
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