Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------MLTTRKALYYLDKGK--TKEAIRLLETCWKQEVTTKNKRDIFTATVLLSDVLYQSGEHFPEIYQQLMSILEEMQDLEAVEFEREKA-----KQIFAELDEYFSEVGTFFQGDSLAELWLEFDYENDYKDVYPTPQRVAAIEAELGYKLPKSYIYLMRHT--QNGGIVSTGSVPTTEPSSWSENCVAITGIMGI------GNQGISALNGMHNTNFWIEEWGYPDVGLAIADCPSAGHDMVFLDYRNCGKTGEPAVVHIDQEADYKIMKLADNFEAFILSLYREEY---------------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4OFZ Chain:A ((85-513)) | QTVDDFKNLMYKMQETRRAIVFALLNEKDLTKDDVEILKRAYE-KLTDNFQREMCTLTTKLS----------VNIGDETRGLEKDLKYLDALMNIRREEPNLLWPIIMSRVD-LFSILANYHPKG-------KETFLKEYEDTVKFLKTFISSEAITGKKP--IFITDWDGTMKDYCSQYATNLQPVYSAVGMTRFAASFTRISAVLTAGPLRGPGILDLTAMPIDG---------PVMFSG----SWGREWWLSGKRVVHQDG------ITDEGFNALQRLDDEMKDLLHTSPFALVGSGVQRKVDRLTLGVQTVCHHVTSELSNRYQMAVKERMHNSQILVFDPSTELEVEVVAHNSGIIWNKGNGVERLIKSLGDSLQSPGKILICGDTLSDIPMVRQAVKQNPDGVLAIFVGAKMSLREEVKQVIGDESRCCFVSCPDVIHAAMSQILNEHCIG |
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General information:
TITO was launched using:
| RESULT:
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Template: 4OFZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -29309 for 1456 contacts (-20.1/contact) +
2D Compatibility (PS) -24773 + (NN) -4901 + (LL) 2792
1D Compatibility (HY) -7200 + (ID) 2300
Total energy: -65691.0 ( -45.12 by residue)
QMean score : 0.239
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