Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MANLSELPNIGKVLEQDLIKAGIKTPAELKDVGSKEAFLRIWENDSSVCLSELCALEGAVQGIRWHDLDEAKKSELKKFHQSL
2VA8 Chain:A ((658-695))
--ELVQISGVGRKRARLLYNNGIKELGDVV-MNPDKVKNLL------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
2VA8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -5737 for 223 contacts (-25.7/contact) +
2D Compatibility (PS) -4057 + (NN) -1426 + (LL) 3320
1D Compatibility (HY) -2000 + (ID) 300
Total energy: -10200.0 ( -45.74 by residue)
QMean score : 0.823
(partial model without unconserved sides chains):
PDB file :
Tito_2VA8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2VA8-query.scw
PDB file :
Tito_Scwrl_2VA8.pdb
: