Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MNKWLVKASSLVVLGGMVLSAGSRVLADTYVRPIDNGRITTGFNG---YPGHCGVDYAVPTGTIIRAVADGTVKFAGAGANFSWMTDLAGNCVMIQHADG-MHSGYAHMSRVVARTGEKVKQGDIIGYVGATGMATGPHLHFEFLPANPNFQNG--FHGRINPTSLIANVATFSGKTQASAPSIKPLQSAPVQNQSSKLKVYRVDELQKVNGVWLVKNNTLTPTGFDWNDNGIPASEIDEVDANGNLTADQVLQKGGYFIFNPKTLKTVEKPIQGTAGLTWAKTRFANGSSVWLRVDNSQELLYK |
1QWY Chain:A ((163-289)) | ----------------------------DASWLTS-RKQLQPYGQYHGGGAHYGVDYAMPENSPVYSLTDGTVVQAG------WSNYGGGNQVTIKEANSNNYQWYMHNNRLTVSAGDKVKAGDQIAYSGSTGNSTAPHVHFQRM------SGGIGNQYAVDPTSYLQ----------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QWY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -85431 for 921 contacts (-92.8/contact) +
2D Compatibility (PS) -12847 + (NN) -2172 + (LL) 9388
1D Compatibility (HY) -1200 + (ID) 2100
Total energy: -94362.0 ( -102.46 by residue)
QMean score : 0.420
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