Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSIKKSVIGFCLGAAALSMFACVDSSQSVMAAEKDKVEITWWAFPTFTQEKAKDGVGTYEKKVIKAFEKKNPNIKVKLETI--DFTSGPEKITTAIEAGTAPDVLFDAPGRIIQYGKNGKLADLNDLFTDQFIKDVNNKNIIQASKSGDKAYMYPISSAPFYMAFNKKMLKDAGVLKLVKEGWTTSDFEKVLKALKNKGYTPGSFFANGQGGDQGPRAFFANLYSAPITDKEVTKYTTDTKNSVKSMKKIVEWIKKGYLMNGSQYDGSADIQNFANGQTAFTILWAPAQPKTQAKLLESSKVDYLEVPFPSEDGKPDLEYLVNGFAVFNNKDENKVKASKKFITFIADDKKWGPKDVIRTGAFPV--------RTSFGDLYKGDKRMMKISKWTQYYSPYYNTIDGFSEMRTLWFPMVQSVSNGDEKPADALKDFTQKANDTIKKAAK--- |
| 2Z8F Chain:B ((10-411)) | ------------------------------TDDGGVVNITYMHRLPDSEG------MTLVNDIVAKWNKQHPDIQVKATKFDGKASDMIKKLETDVKSGEAPDLAQVGYAELPEVFTKGLLQDVTQYAEQYKND--FASGPYSLVQVGGKAYGLPQDTGPLVYFYNKAEFEKLG---ITEIPQTADEFIAAAKTAAAAG--KYIMSYQPDEAGNMISGLAGASGGWYKVKGDSWVVNTETDGSKATADFYQQLLDAK-AATTNPRWDPSFDASIKDGSLIGTVAAAWEAPLFMTSSGGTGSGEWQVAQLGDWFGNAGKTGPDGGSAVAVLKNSKHPKEAMEFLDWFNTQ----VPDLVSQGLVPAATTEDAETPSEWSTFFGGQDIMKEFKTANNNMGDF----TYMPGFSAVAAKMNETAAKATGKVADIFSDAQTTSVDTLKNFGLSVS |
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General information:
TITO was launched using:
| RESULT:
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Template: 2Z8F.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -3114 for 3425 contacts (-0.9/contact) +
2D Compatibility (PS) -41360 + (NN) -18320 + (LL) 3952
1D Compatibility (HY) -1600 + (ID) 2900
Total energy: -63342.0 ( -18.49 by residue)
QMean score : 0.460
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