Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKEDVIEIEGKVVETMPNAMFTVELENGHQILATVSGKIRKNYIRILVGDRVTVEMSPYDL-TRGRITYRFK-----------------
1JT8 Chain:A ((20-102))
------NEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRI-WVREGDVVIVKPWEVQGDQKCDIIWRYTKTQVEWLKRKGYLDELL
General information:
TITO was launched using:
RESULT:
Template:
1JT8.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24766 for 435 contacts (-56.9/contact) +
2D Compatibility (PS) -6907 + (NN) -259 + (LL) 840
1D Compatibility (HY) -3600 + (ID) 650
Total energy: -35342.0 ( -81.25 by residue)
QMean score : 0.364
(partial model without unconserved sides chains):
PDB file :
Tito_1JT8.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1JT8-query.scw
PDB file :
Tito_Scwrl_1JT8.pdb
: