Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKITKIEKKKRLYTLELDNTENLYITEDTIVHFMLSKGMIVNAEKLE----NIKKFAQLSYGKNLGLYYISFKQRTEKEVIKYLQQHDIDSKIIPQIIDNLKSENWINDKNYVQSFIQQNLNTGDKGPYVIKQKLLQKGIKSKIIESELQAINFQDLASKI--SQKLYKKYQNKLPLKALKDKLMQSLTTKGFDYQIAHTVIQNLEIEKDQE---LEEDLIYKELDKQYQKLSKKYDQYELKQRIINALMRKGYQYEDIKSALREYL----------------------------------------- |
| 2PTR Chain:A ((1-459)) | MELSSLTAVSPVDGRYGDKVSALRGIFSEYGLLKFRVQVEVRWLQKLAAHAAIKEVPAFAADAIGYLDAIVASFSEEDAARIKTIERTTNHDVKAVEYFLKEKVAEIPELHAVSEFIHFACTSEDINNLSHALMLKTARDEVILPYWRQLIDGLKDLAVQYRDIPLLSRTAGQPATPSTIGKEMANVAYRMERQYRQLNQVEILGKINGAVGNY-NAHIAAYPEVDWHQFSE-EFVTSLGIQWNPYTTQIEPH--DYIAELFDCVARFNTILIDFDRDVWGYIA---LNHFKQKTIAGEIG--------------SSTMPHKVNPIDFENSEGNLGLSNAVLQHLASKLPVSRWQRDLTDSTVLRNLGVGIGYALIAYQSTLKGVSKLEVNRDHLLDELDHNWEVLAEPIQTVMRRYGIEK-------PYEKLKELVDAEGMKQFIDGLALPEEEKARLKAMTPANYIGRAITMVDELKHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PTR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 58844 for 1478 contacts (39.8/contact) +
2D Compatibility (PS) -24393 + (NN) -6455 + (LL) 2808
1D Compatibility (HY) -9600 + (ID) 1800
Total energy: 19404.0 ( 13.13 by residue)
QMean score : 0.168
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