Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQK---E----DFKEGLPEFASIDVSFISLNLILPALKEILVDGGQVVALIKPQFEAGREQIGKNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
3OPN Chain:A ((14-222)) | ----------------------------------------------------------KLRYVSRGGLKLEKALKEFHLEINGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWK-IRSDERVV-VMEQFNFRNAVLADFEQGRPSFTSIDVSFIS-----LDLILPPLYEILEKNGEVAALIKPQFEAGREQVG-NGIIRDPKVHQMTIEKVLKTATQLGFSVKGLTFSPIKGGAGNVEFLVHLLKDGKAEIAQQVNIESVLQKESE-------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3OPN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -70546 for 1716 contacts (-41.1/contact) +
2D Compatibility (PS) -20625 + (NN) -743 + (LL) 5544
1D Compatibility (HY) -16400 + (ID) 5050
Total energy: -107820.0 ( -62.83 by residue)
QMean score : 0.463
|
|
|