Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRVYENKEELKKEISKTFEKYIMEFNNI-PENLKDKRIDEVDRTPAENLSYQVGWTNLVLKWEEDERKGLQVKTPSDKFKWNQLGELYQWFTDTYAHLSLQELKAKLNEN--INSI----YAMIDLLSEEELFEAHMRKWADEATK---TATWEVYKFIHVNTVAPFGTFRTKIRKWKKIVL-
1BOW Chain:A ((1-158))
-----RLGEVFVLDEEEIRIIQTEAEGIGPENVLNASYSKLKKFIESNNSYGATFSF---------------------QPYTSIDEM------TYRHIFTPVLISSITPDMEITTIPKGRYACIAYNFSPEHYFLNLQKLIKYIADRQLTVVSDVYELIIP--------IHYEYRVEMKIRIL
General information:
TITO was launched using:
RESULT:
Template:
1BOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -23916 for 923 contacts (-25.9/contact) +
2D Compatibility (PS) -13836 + (NN) 1664 + (LL) 2768
1D Compatibility (HY) -7600 + (ID) 1400
Total energy: -42320.0 ( -45.85 by residue)
QMean score : 0.218
(partial model without unconserved sides chains):
PDB file :
Tito_1BOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1BOW-query.scw
PDB file :
Tito_Scwrl_1BOW.pdb
: