Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | -------MIEIAVLIIAIAFVVLVLGILFVLKKVSETIEETKQTIKVLTSDVNVTLY--------QTNEILAKANV------LVDDVNGKVSTIDPLFV-----AIADLSESVSDLNLQARHIGQKASSATSSVTKAGSALAIGKAASKIFRKK------GDKK------------- |
1D4O Chain:A ((5-181)) | GTHTEINLDNAIDMIREANSIIITPGYGLCAAKAQYPIADLVKMLSEQGKKVRFGIHPVAGRMPGQLNVLLAEAGVPYDIVLEMDEINHDFPDTDLVLVIGANDTVNSAAQEDPNSIIAGMPVLEVWKSKQVIVMKRSLGVGYAAVDNPIFYKPNTAMLLGDAKKTCDALQAKVRES |
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General information:
TITO was launched using:
| RESULT:
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Template: 1D4O.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -59499 for 963 contacts (-61.8/contact) +
2D Compatibility (PS) -13989 + (NN) -2138 + (LL) 0
1D Compatibility (HY) -4800 + (ID) 1200
Total energy: -81626.0 ( -84.76 by residue)
QMean score : 0.280
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